RNDr. Petr Nguyen, Ph.D.

Job Position: Head of Laboratory - Laboratory of Evolutionary Genetics

Contact details

Phone: +420 38 777 5226
E-mail: petr.nguyen@entu.cas.cz

Description

" Chromosomics, evolutionary genetics,  meiotic sex and sex chromosomes, chromosomal speciation, genetics of Lepidoptera

Publications
Total found: 52 records
Dalíková M., Provazníková I., Provazník J., Grof-Tisza P., Pepi A., Nguyen P. (2023) The role of repetitive sequences in repatterning of major ribosomal DNA clusters in Lepidoptera. Genome Biology and Evolution 15 : evad090.
DOI: 10.1093/gbe/evad090
Štundlová J., Hospodářská M., Lukšíková K., Volenikova A., Pavlica T., Altmanová M., Richter A., Reichard M., Dalíková M., Pelikánová Š., Marta A., Simanovsky S.A., Hiřman M., Jankásek M., Dvořák T., Bohlen J., Ráb P., Englert C., Nguyen P., Sember A. (2022) Sex chromosome differentiation via changes in the Y chromosome repeat landscape in African annual killifishes Nothobranchius furzeri and N. kadleci. Chromosome Research 30 : 309-33.
DOI: 10.1007/s10577-022-09707-3
Voleníková A., Nguyen P., Davey P., Sehadová H., Kludkiewicz B., Koutecky P., Walters J. R., Roessingh P., Provazníková I., Šerý M., Žurovcová M., Hradilova M., Rouhová L., Žurovec M. (2022) Genome sequence and silkomics of the spindle ermine moth, Yponomeuta cagnagella, representing the early diverging lineage of the ditrysian Lepidoptera. Communications Biology 5 : 1281.
DOI: 10.1038/s42003-022-04240-9
Ávila Herrera I. M., Král J., Pastuchová M., Forman M., Musilová J., Kořínková T., Šťáhlavský F., Zrzavá M., Nguyen P., Just P., Haddad C. R., Hiřman M., Koubová M., Sadílek D., Huber B. A. (2021) Evolutionary pattern of karyotypes and meiosis in pholcid spiders (Araneae: Pholcidae): implications for reconstructing chromosome evolution of araneomorph spiders. BMC Ecology and Evolution 21 : 75.
DOI: 10.1186/s12862-021-01750-8
Provazníková I., Hejníčková M., Visser S., Dalíková M., Carabajal Paladino L. Z., Zrzavá M., Voleníková A., Marec F., Nguyen P. (2021) Large‑scale comparative analysis of cytogenetic markers across Lepidoptera. Scientific Reports 11 : 12214.
DOI: 10.1038/s41598-021-91665-7
Sember A., Nguyen P., Perez M.F., Altmanová M., Ráb P., de Bello Cioffi M. (2021) Multiple sex chromosomes in teleost fishes from a cytogenetic perspective: state of the art and future challenges. Philosophical Transactions B 376 : article number: 20200098.
DOI: 10.1098/rstb.2020.0098
Visser S., Voleníková A., Nguyen P., Verhulst E. C., Marec F. (2021) A conserved role of the duplicated Masculinizer gene in sex determination of the Mediterranean flour moth, Ephestia kuehniella. PLoS Genetics 17 : e1009420.
DOI: 10.1371/journal.pgen.1009420
Sember A., Pappová M., Forman M., Nguyen P., Marec F., Dalíková M., Divišová K., Doležálková-Kaštánková M., Zrzavá M., Sadílek D., Hrubá B., Král J. (2020) Patterns of sex chromosome differentiation in spiders: insights from comparative genomic hybridisation. Genes 11 : 849.
DOI: 10.3390/genes11080849
Singh K. S., Troczka B. J., Duarte A., Balabanidou V., Trissi N., Carabajal Paladino L. Z., Nguyen P., Zimmer C. T., Papapostolou K. M., Randall E., Lueke B., Marec F., Mazzoni E., Williamson M. S., Hayward A., Nauen R., Vontas J., Bass C. (2020) The genetic architecture of a host shift: An adaptive walk protected an aphid and its endosymbiont from plant chemical defenses. Science Advances 6 : eaba1070.
DOI: 10.1126/sciadv.aba1070
Šťáhlavský F., Nguyen P., Sadílek D., Štundlová J., Just P., Haddad C., Koç H., Ranawana K.B., Stockmann M., Yağmur E.A., Kovařík F. (2020) Evolutionary dynamics of rDNA clusters on chromosomes of buthid scorpions (Chelicerata: Arachnida). Biological Journal of the Linnean Society 131 : 547-565.
DOI: 10.1093/biolinnean/blaa118
Yen E.C., McCarthy S.A., Galarza J.A., Generalovic T.N., Pelan S., Nguyen P., Meier J.I., Warren I.A., Mappes J., Durbin R., Jiggins C.D. (2020) A haplotype-resolved, de novo genome assembly for the wood tiger moth (Arctia plantaginis) through trio binning. GigaScience 9 : giaa088.
DOI: 10.1093/gigascience/giaa088
Yoshido A., Šíchová J., Pospíšilová K., Nguyen P., Šafář J., Provazník J., Voleníková A., Vila R., Marec F. (2020) Evolution of multiple sex-chromosomes associated with dynamic genome reshuffling in Leptidea wood-white butterflies. Heredity 125 : 138–154.
DOI: 10.1038/s41437-020-0325-9
Carabajal Paladino L. Z., Provazníková I., Berger M., Bass C., Aratchige N. S., López S. N., Marec F., Nguyen P. (2019) Sex chromosome turnover in moths of the diverse superfamily Gelechioidea. Genome Biology and Evolution 11 : 1307–1319.
DOI: 10.1093/gbe/evz075
Štundlová J., Šmíd J., Nguyen P., Šťáhlavský F. (2019) Cryptic diversity and dynamic chromosome evolution in Alpine scorpions (Euscorpiidae: Euscorpius). Molecular Phylogenetics and Evolution 134 : 152-163.
DOI: 10.1016/j.ympev.2019.02.002
Wan F., Yin C., Tang R., Chen M., Wu Q., Huang C., Qian W., Rota-Stabelli O., Yang N., Wang S., Wang G., Zhang G., Guo J., Gu L., Chen L., Xing L., Xi Y., Liu F., Lin K., Guo M., Liu W., He K., Tian R., Jacquin-Joly E., Franck P., Siegwart M., Ometto L., Anfora G., Blaxter M., Meslin C., Nguyen P., Dalíková M., Marec F., Olivares J., Maugin S., Shen J., Liu J., Guo J., Luo J., Liu B., Fan W., Feng L., Zhao X., Peng X., Wang K., Liu L., Zhan H., Liu W., Shi G., Jiang C., Jin J., Xian X., Lu S., Ye M., Li M., Yang M., Xiong R., Walters J. R., Li F. (2019) A chromosome-level genome assembly of Cydia pomonella provides insights into chemical ecology and insecticide resistance. Nature Communications 10 : 4237.
DOI: 10.1038/s41467-019-12175-9
Dalíková M., Zrzavá M., Hladová I., Nguyen P., Šonský I., Flegrová M., Kubíčková S., Voleníková A., Kawahara A.Y., Peters R.S., Marec F. (2017) New insights into the evolution of the W chromosome in Lepidoptera. Journal of Heredity 108 : 709-719.
DOI: 10.1093/jhered/esx063
Mongue A.J., Nguyen P., Voleníková A., Walters J.R. (2017) Neo-sex chromosomes in the Monarch butterfly, Danaus plexippus. G3 (Bethesda) 7 : 3281-3294.
DOI: 10.1534/g3.117.300187
Sauer A. J., Fritsch E., Undorf-Spahn K., Nguyen P., Marec F., Heckel D. G., Jehle J. A. (2017) Novel resistance to Cydia pomonella granulovirus (CpGV) in codling moth shows autosomal and dominant inheritance and confers cross-resistance to different CpGV genome groups. PLoS ONE 12 : e0179157.
DOI: 10.1371/journal.pone.0179157
Nguyen P., Carabajal Paladino L. Z. (2016) On the neo-sex chromosomes of Lepidoptera. In: Pontarotti P (ed.): Evolutionary Biology: Convergent Evolution, Evolution of Complex Traits, Concepts and Methods. Springer, Heidelberg, ISBN: 978-3-319-41324-2, pp. 171-185.
DOI: 10.1007/978-3-319-41324-2_11
Nováková E., Hypša V., Nguyen P., Husník F., Darby A. (2016) Genome sequence of Candidatus Arsenophonus lipopteni, the exclusive symbiont of a blood sucking fly Lipoptena cervi (Diptera: Hippoboscidae). Standards in Genomic Sciences 11 : article number 72.
DOI: 10.1186/s40793-016-0195-1

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CONTACT

Biology Centre CAS
Institute of Entomology
Branišovská 1160/31
370 05 České Budějovice

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